PXD053848

PXD053848 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pull down of enzymes using alpha-amylase activity based probes from a complex compost sample
Description	This experiment aimed to identify new GH13 alpha-amylaases from a complex compost sample using activity based probes. The substrate specificities of these novel enzymes could also be assigned by using -1 and -2 branched activity based probes.
HostingRepository	PRIDE
AnnounceDate	2025-06-16
AnnouncementXML	Submission_2025-06-16_04:42:40.305.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Isabelle Pickles
SpeciesList	scientific name: Aeribacillus pallidus; NCBI TaxID: 33936; scientific name: Geobacillus thermodenitrificans; NCBI TaxID: 33940; scientific name: Pseudoxanthomonas suwonensis J47; NCBI TaxID: 935568; scientific name: Parageobacillus toebii; NCBI TaxID: 153151;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	timsTOF HT

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-10 09:03:49	ID requested
⏵ 1	2025-06-16 04:42:40	announced

Publication List

10.1002/ANIE.202415219;

10.1002/ANIE.202415219;

Keyword List

submitter keyword: alpha-amylases, TIMS-TOF HT,Activity-based probes, pull-down, glycoside hydrolase

submitter keyword: alpha-amylases, TIMS-TOF HT,Activity-based probes, pull-down, glycoside hydrolase

Contact List

Gideon J. Davies
contact affiliation	University of York
contact email	gideon.davies@york.ac.uk
lab head
Isabelle Pickles
contact affiliation	University of York
contact email	isabelle.pickles@york.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/06/PXD053848
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/06/PXD053848

PRIDE project URI

Repository Record List

[ + ]