PXD053794

PXD053794 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	EvoSep-timsTOF proximity dependent biotinylation optimization
Description	This dataset involved the optimization of proximity dependent biotinylation experiments across the available EvoSep gradients on a Bruker timsTOF Pro 2 MS. Various different sample loads are compared and statistically significant preys are used to select optimal settings for these kinds of experiments.
HostingRepository	MassIVE
AnnounceDate	2024-09-30
AnnouncementXML	Submission_2024-09-30_09:09:43.121.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Gingras Lab
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	timsTOF Pro 2

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-09 05:57:18	ID requested
⏵ 1	2024-09-30 09:09:43	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: BioID, EvoSep, protein-protein interactions, spectral counts, timsTOF Proximity-dependent biotinylation, BioID, interactions, Significance Analysis of INTeractome, EvoSep, timsTOF, spectral counts, cytoskeleton

submitter keyword: BioID, EvoSep, protein-protein interactions, spectral counts, timsTOF Proximity-dependent biotinylation, BioID, interactions, Significance Analysis of INTeractome, EvoSep, timsTOF, spectral counts, cytoskeleton

Contact List

Anne-Claude Gingras
contact affiliation	LTRI
contact email	gingras@lunenfeld.ca
lab head
Gingras Lab
contact affiliation	Samuel Lunenfeld Research Institute
contact email	gingras@mshri.on.ca
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095270/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095270/