PXD053698 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Mouse CSF analysis of 3, 6, and 12 months old mice in comparison to human CSF |
Description | Mice are the most commonly used preclinical animal model, but protein analytics of murine cerebrospinal fluid (CSF) remains challenging because of low CSF volume (often <10 µl) and frequent blood contaminations. We developed an improved CSF sampling method that allows routine collection of increased volumes (20-30 µl) of pure CSF from individual mice, enabling multiple protein analytical assays from a single sample. Here, we have analysed the CSF of 3, 6, and 12 months old wild-type mice. Additionally, we collected murine CSF of the same mice at 3 and 6 months of age to compare repeated and single CSF sampling. Furthermore, we analysed human CSF samples as a reference. |
HostingRepository | PRIDE |
AnnounceDate | 2025-04-15 |
AnnouncementXML | Submission_2025-04-15_09:27:39.011.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Stephan Mueller |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-07-05 07:15:14 | ID requested | |
⏵ 1 | 2025-04-15 09:27:39 | announced | |
Publication List
Lourbopoulos A, M, ü, ller SA, Jocher G, Wick M, Plesnila N, Lichtenthaler SF, An Improved Method for Sampling and Quantitative Protein Analytics of Cerebrospinal Fluid of Individual Mice. Mol Cell Proteomics, 24(5):100958(2025) [pubmed] |
10.1016/j.mcpro.2025.100958; |
Keyword List
submitter keyword: cerebrospinal fluid, CSF, mouse,human |
Contact List
Stefan F. Lichtenthaler |
contact affiliation | DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany |
contact email | stefan.lichtenthaler@dzne.de |
lab head | |
Stephan Mueller |
contact affiliation | DZNE Munich Neuroproteomics |
contact email | stephan.mueller@dzne.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD053698 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD053698
- Label: PRIDE project
- Name: Mouse CSF analysis of 3, 6, and 12 months old mice in comparison to human CSF