PXD053111

PXD053111 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A Closer Look at Plastic Colonisation
Description	The aim of this study was to investigate the plastic colonisation process, to identify the active taxa involved in biofilm formation and the mechanisms used to initiate colonisation. To achieve this, a marine plastisphere characterised by active hydrocarbonoclastic genera was used as the inoculum for a short-term microcosm experiment using virgin low-density polyethylene as the sole carbon source. Following incubation for 1 and 2 weeks (representing early and late colonisation, respectively), a taxonomic and comparative metaproteomic approach was used to explore shifts in diversity and function.
HostingRepository	MassIVE
AnnounceDate	2024-06-14
AnnouncementXML	Submission_2024-06-14_04:40:18.221.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Lauren Messer
SpeciesList	scientific name: environmental samples ; NCBI TaxID: 33858;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 6600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-06-14 04:09:44	ID requested
⏵ 1	2024-06-14 04:40:18	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: plastisphere colonisation, metaproteomics, plastic microcosm

submitter keyword: plastisphere colonisation, metaproteomics, plastic microcosm

Contact List

Sabine Matallana Surget
contact affiliation	University of Stirling
contact email	sabine.matallanasurget@stir.ac.uk
lab head
Lauren Messer
contact affiliation	University of Stirling
contact email	lauren.messer@stir.ac.uk
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095034/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095034/