PXD052403 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Calculating coefficients of variation for data independent acquisition-based proteomics |
Description | Reanalysis of the Kawashima et al dataset with DIA-NN and Spectronaut. By using different settings this shows how the CVs can be altered by the software parameters. |
HostingRepository | PRIDE |
AnnounceDate | 2024-05-20 |
AnnouncementXML | Submission_2024-05-20_03:39:28.385.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Alejandro Brenes |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-05-20 03:32:11 | ID requested | |
⏵ 1 | 2024-05-20 03:39:28 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: intensity, proteomics,CV, coefficient of variation |
Contact List
Alejandro Brenes |
contact affiliation | Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh |
contact email | abrenes@ed.ac.uk |
lab head | |
Alejandro Brenes |
contact affiliation | Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh |
contact email | ajbrenesmurillo@dundee.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD052403 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD052403
- Label: PRIDE project
- Name: Calculating coefficients of variation for data independent acquisition-based proteomics