PXD052403

PXD052403 is an original dataset announced via ProteomeXchange.

Title	Calculating coefficients of variation for data independent acquisition-based proteomics
Description	Reanalysis of the Kawashima et al dataset with DIA-NN and Spectronaut. By using different settings this shows how the CVs can be altered by the software parameters.
HostingRepository	PRIDE
AnnounceDate	2024-05-20
AnnouncementXML	Submission_2024-05-20_03:39:28.385.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alejandro Brenes
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-20 03:32:11	ID requested
⏵ 1	2024-05-20 03:39:28	announced

Dataset with its publication pending

submitter keyword: intensity, proteomics,CV, coefficient of variation

Alejandro Brenes
contact affiliation	Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh
contact email	abrenes@ed.ac.uk
lab head
Alejandro Brenes
contact affiliation	Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh
contact email	ajbrenesmurillo@dundee.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD052403

PRIDE project URI

• PRIDE
  1. PXD052403
     1. Label: PRIDE project
     2. Name: Calculating coefficients of variation for data independent acquisition-based proteomics