PXD052400

PXD052400 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	SMAX1/SMXL2 interacting proteins in Arabidopsis seedling through IP-MS
Description	Karrikins (KARs) are a class of butenolide molecules found in smoke. KARs regulate many aspects of plant development and environmental responses, including Seed germination, hypocotyl elongation, leaf shape, root development, and resistance to drought, salt, and heat stress. The transcriptional repressor proteins SUPPRESSOR OF MAX2 1 (SMAX1) and SMAX1-like2 (SMXL2) integrate karrikin signaling by repressing gene expression through direct binding to promoters or through inhibiting activities of transcription factors. To elucidate the mechanism by which SMAX1 and SMXL2 mediate KAR signaling, we performed immunoprecipitation followed by mass spectrometry (IP-MS) analysis and identified peptides in transgenic seedlings that overexpress GFP, SMAX1-GFP, and SMXL2-GFP, respectively.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:46:18.345.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	wenwen chang
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-20 02:02:16	ID requested
1	2024-06-22 03:28:02	announced
⏵ 2	2024-10-22 06:46:19	announced	2024-10-22: Updated project metadata.

Publication List

Chang W, Qiao Q, Li Q, Li X, Li Y, Huang X, Wang Y, Li J, Wang B, Wang L, Non-transcriptional regulatory activity of SMAX1 and SMXL2 mediates karrikin-regulated seedling response to red light in Arabidopsis. Mol Plant, 17(7):1054-1072(2024) [pubmed]
10.1016/j.molp.2024.05.007;

Chang W, Qiao Q, Li Q, Li X, Li Y, Huang X, Wang Y, Li J, Wang B, Wang L, Non-transcriptional regulatory activity of SMAX1 and SMXL2 mediates karrikin-regulated seedling response to red light in Arabidopsis. Mol Plant, 17(7):1054-1072(2024) [pubmed]

10.1016/j.molp.2024.05.007;

Keyword List

submitter keyword: SMAX1, Arabidopsis thaliana,IP-MS, SMXL2, Seedling, Karrikin

submitter keyword: SMAX1, Arabidopsis thaliana,IP-MS, SMXL2, Seedling, Karrikin

Contact List

Lei Wang
contact affiliation	Institute of Genetics and Developmental Biology Center for Agricultural Resources Research, Shijiazhuang, Hebei CHINA
contact email	wanglei@sjziam.ac.cn
lab head
wenwen chang
contact affiliation	Institute of Genetics and Developmental Biology Center for Agricultural Resources Research
contact email	changwenwen18@mails.ucas.ac.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD052400
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD052400

PRIDE project URI

Repository Record List

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