PXD052274

PXD052274 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of neuronal surface autoantigens in serum samples from a patient with thymoma-associated limbic encephalitis, comparison of pre- and postoperative thymoma by LC-MS/MS analysis
Description	Mouse brain tissue lysates were immunoprecipitated with protein A/G Sepharose beads which had been incubated with serum from patient or control participant. The immune complexes were subsequently separated by SDS‒PAGE. Bands were excised from the gel, and trypsin-digested samples were subjected to liquid chromatography-tandem mass spectrometry (LC-MS/MS) using an Orbitrap Velos Pro (Thermo Scientific). MS/MS dataset analysis was performed using the Mascot software program (Matrix Science).
HostingRepository	jPOST
AnnounceDate	2025-05-16
AnnouncementXML	Submission_2025-05-15_08:00:04.824.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yusuke Kawashima
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
Instrument	LTQ Orbitrap Velos Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-15 19:07:30	ID requested
⏵ 1	2025-05-15 08:00:05	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: autoimmune limbic encephalitis, LGI1, a disintegrin and metalloproteinase (ADAM) family protein, voltage-gated potassium channel (VGKC)

submitter keyword: autoimmune limbic encephalitis, LGI1, a disintegrin and metalloproteinase (ADAM) family protein, voltage-gated potassium channel (VGKC)

Contact List

Tomoaki Tanaka
lab head
Yusuke Kawashima
contact affiliation	Kazusa DNA Research Institute
dataset submitter

Full Dataset Link List

jPOST dataset URI
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jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003113/