PXD052120

PXD052120 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic Analysis of Carotid Artery Plaques With and Without Vulnerable Features on Magnetic Resonance Angiography with Vessel Wall Imaging: A Pilot Study
Description	Single-center, cohort study of plaques identified with and without vulnerable features on magnetic resonance angiography with vessel wall imaging. Proteomic analysis of these plaques demonstrates different protein composition. These proteins may be used for early detection and intervention or as pharmacologic targets in patients with higher risk for stroke carotid artery disease.
HostingRepository	PRIDE
AnnounceDate	2025-05-07
AnnouncementXML	Submission_2025-05-06_16:05:16.172.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD052120
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Benjamin Madden
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-08 17:03:15	ID requested
⏵ 1	2025-05-06 16:05:17	announced

Publication List

10.1016/j.jvssci.2025.100281;
10.6019/PXD052120;
Madden BJ, Polania-Sandoval C, Pujari GP, Mangalaparthi KK, Charlesworth MC, Prudencio M, Gendron T, Sandhu SJS, Nassar A, Petrucelli L, Meschia JF, Pandey A, Erben Y, Proteomic analysis of carotid artery plaques with and without vulnerable features on magnetic resonance angiography with vessel wall imaging: a pilot study. JVS Vasc Sci, 6():100281(2025) [pubmed]

10.1016/j.jvssci.2025.100281;

10.6019/PXD052120;

Madden BJ, Polania-Sandoval C, Pujari GP, Mangalaparthi KK, Charlesworth MC, Prudencio M, Gendron T, Sandhu SJS, Nassar A, Petrucelli L, Meschia JF, Pandey A, Erben Y, Proteomic analysis of carotid artery plaques with and without vulnerable features on magnetic resonance angiography with vessel wall imaging: a pilot study. JVS Vasc Sci, 6():100281(2025) [pubmed]

Keyword List

submitter keyword: LC-MSMS,Human carotid plaques, LCM/FFPE

submitter keyword: LC-MSMS,Human carotid plaques, LCM/FFPE

Contact List

Young Erben
contact affiliation	Department of Vascular and Endovascular Surgery
contact email	Erben.young@mayo.edu
lab head
Benjamin Madden
contact affiliation	Mayo Clinic
contact email	madden.benjamin@mayo.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD052120
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD052120

PRIDE project URI

Repository Record List

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