PXD052014

PXD052014 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mass spectrometry analysis of purified virions of Rhodobacter microvirus Ebor
Description	Single-stranded DNA bacteriophages of the Microviridae family are emerging as major components of the global virosphere, found abundantly across diverse habitats. We have identified and thoroughly characterized a new type of microvirus, Ebor, which infects the freshwater mixotrophic model bacterium Rhodobacter capsulatus. Here, we present raw LC-MS/MS data of partially purified virions of Ebor propagated on R. capsulatus strain SB1003. The sample E025 corresponds to ion-exchange purified virions, the sample D972 TOP to upper band obtained by CsCl gradient ultracentrifugation containing mostly flagella and the sample D972 BOTTOM to lower band of the respective centrifugation containing native virions.
HostingRepository	MassIVE
AnnounceDate	2025-02-11
AnnouncementXML	Submission_2025-02-11_07:35:54.390.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Pavol Bardy
SpeciesList	scientific name: Rhodobacter phage Ebor;
ModificationList	unknown modification
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-05-06 06:20:12	ID requested
⏵ 1	2025-02-11 07:35:54	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Rhodobacter, bacteriophage, microvirus, Microviridae, Tainavirinae, virion component

submitter keyword: Rhodobacter, bacteriophage, microvirus, Microviridae, Tainavirinae, virion component

Contact List

Pavol Bardy
contact affiliation	University of York
contact email	pavol.bardy@york.ac.uk
lab head
Alfred A. Antson
contact affiliation	University of York
contact email	fred.antson@york.ac.uk
lab head
Pavol Bardy
contact affiliation	University of York
contact email	pavol.bardy@york.ac.uk
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v07/MSV000094685/