PXD051722

PXD051722 is an original dataset announced via ProteomeXchange.

Title	Isomeric Differences in Nanoparticle’s Surface Chemistry Alters Macrophage Interactions In Vitro Due to Protein Corona
Description	The interactions of nanoparticles (NPs) with macrophages after intravenous injection are critical in determining their biodistribution and pharmacokinetics. The formation of protein corona (PC) on the nanoparticles, often a result of NP-plasma protein interactions, influences macrophage response, thereby directly determining the NP's fate in vivo. While the effect of NP’s surface chemistry on the protein corona formation and macrophage interaction is extensively studied, the results are often confounded by the effects of surface charge and hydrophobicity. Therefore, to assess the impact of NP’s surface chemistry alone on protein corona and NP-macrophage interactions, we developed gold (Au) NPs surface modified with the isomeric amino acids leucine (Leu) and isoleucine (Iso leu), which have similar isoelectric point and hydropathy indices. The synthesized NPs had similar size, zeta potential, hydrophobicity, and morphology. Incubation of the NPs in plasma under flow conditions resulted in protein corona (PC) that differed in the amount and composition. Pathway analysis showed that these variations in the PC corresponded with the activation of different phagocytic and inflammatory pathways. These in silico analyses were confirmed in macrophages, which showed higher uptake of Leu AuNP-PC complex compared to Iso leu AuNP-PC and a corresponding increase in the inflammatory cytokines. These studies demonstrate the sensitivity of the PC to subtle changes in the surface chemistry of NPs, which could have significant in vivo implications for the clinical application of NPs.
HostingRepository	PRIDE
AnnounceDate	2025-10-06
AnnouncementXML	Submission_2025-10-05_16:16:33.761.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD051722
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Sridevi Baradhwaj Conjeevaram
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2024-04-24 15:13:45	ID requested
⏵ 1	2025-10-05 16:16:34	announced

10.1021/acsomega.5c03123;

10.6019/PXD051722;

Conjeevaram SB, Kadaba A, Adjei IM, Isomeric Differences in Nanoparticle's Surface Chemistry Alter Macrophage Interactions In Vitro Due to Protein Corona. ACS Omega, 10(37):42346-42359(2025) [pubmed]

submitter keyword: Protein corona

Isaac Adjei
contact affiliation	Texas A&M University
contact email	adjeii@tamu.edu
lab head
Sridevi Baradhwaj Conjeevaram
contact affiliation	Texas A&M University
contact email	sconjeevaram@tamu.edu
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD051722
     1. Label: PRIDE project
     2. Name: Isomeric Differences in Nanoparticle’s Surface Chemistry Alters Macrophage Interactions In Vitro Due to Protein Corona