PXD051009

PXD051009 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Whole-cell proteome of Pyrodictium abyssi strain AV2
Description	Identification of the proteins from tryptic digests of Pyrodictium abyssi strain AV2 whole-cell proteome followed by nanoLC/OrbitrapFusion MS analysis.
HostingRepository	jPOST
AnnounceDate	2024-07-16
AnnouncementXML	Submission_2024-08-05_04:04:28.339.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shigeru Shimamura
SpeciesList	scientific name: cellular organisms; NCBI TaxID: 131567;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-26 23:16:42	ID requested
1	2024-07-15 23:42:10	announced
⏵ 2	2024-08-05 04:04:29	announced	2024-08-05: Updated PubMed.

Publication List

Nakagawa S, Imachi H, Shimamura S, Yanaka S, Yagi H, Yagi-Utsumi M, Sakai H, Kato S, Ohkuma M, Kato K, Takai K, Characterization of protein glycosylation in an Asgard archaeon. BBA Adv, 6():100118(2024) [pubmed]

Nakagawa S, Imachi H, Shimamura S, Yanaka S, Yagi H, Yagi-Utsumi M, Sakai H, Kato S, Ohkuma M, Kato K, Takai K, Characterization of protein glycosylation in an Asgard archaeon. BBA Adv, 6():100118(2024) [pubmed]

Keyword List

submitter keyword: whole-cell proteome, archaea

submitter keyword: whole-cell proteome, archaea

Contact List

Satoshi Nakagawa
lab head
Shigeru Shimamura
contact affiliation	Japan Agency for Marine-Earth Science and Technology
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003016/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003016/