PXD050673

PXD050673 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Rotifer proteome from SEC fractionated Brachionus rotundiformis
Description	Brachionus rotundiformis were obtained by filtration of a non-axenic culture to remove feeder algae. Rotifers were flash frozen, ground in liquid nitrogen, and lysed by resuspension in buffer containing 0.2% NP40 with dounce homogenization. Native protein lysate was fractionated on an HPLC SEC and all fractions reduced/alkylated and digested with trypsin for LC-MS/MS. Data collection was with a 75 minute top speed DDA method on an Orbitrap fusion using HCD. Data processing was with MSBlender.
HostingRepository	MassIVE
AnnounceDate	2024-03-15
AnnouncementXML	Submission_2024-03-15_13:59:06.557.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ophelia Papoulas
SpeciesList	scientific name: Brachionus rotundiformis; NCBI TaxID: 96890;
ModificationList	Carbamidomethyl
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-15 13:52:49	ID requested
⏵ 1	2024-03-15 13:59:06	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: rotifer, SEC LECA, orbitrap fusion, Brachionus rotundiformis

submitter keyword: rotifer, SEC LECA, orbitrap fusion, Brachionus rotundiformis

Contact List

Edward Marcotte
contact affiliation	University of Texas-Austin
contact email	marcotte@icmb.utexas.edu
lab head
Ophelia Papoulas
contact affiliation	University of Texas at Austin
contact email	papoulas@austin.utexas.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091679/