PXD050670

PXD050670 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Phaeodactylum tricornutum proteome from SEC and IEX fractionation of native extract
Description	Phaeodactylum tricornutum (UTEX 646) grown without silica were used to generate a native protein extract. Extraction involved multiple freeze/thaw cycles, sonication, and solubilization in buffer containing 1% NP40. Following chromatographic separation by SEC or IEX the fractions were reduced/alkylated and digested with trypsin for LC-MS/MS on an orbitrap fusion. Data were collected using a 75 minute top speed DDA method with CID.
HostingRepository	MassIVE
AnnounceDate	2024-03-15
AnnouncementXML	Submission_2024-03-15_13:51:35.588.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ophelia Papoulas
SpeciesList	scientific name: Phaeodactylum tricornutum; NCBI TaxID: 2850;
ModificationList	Carbamidomethyl
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-15 13:50:28	ID requested
⏵ 1	2024-03-15 13:51:35	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: diatom, Phaeodactylum tricornutum, LECA, SEC, IEX, orbitrap fusion

submitter keyword: diatom, Phaeodactylum tricornutum, LECA, SEC, IEX, orbitrap fusion

Contact List

Edward Marcotte
contact affiliation	University of Texas-Austin
contact email	marcotte@icmb.utexas.edu
lab head
Ophelia Papoulas
contact affiliation	University of Texas at Austin
contact email	papoulas@austin.utexas.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v05/MSV000091621/