PXD050484

PXD050484 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	AAV production system proteomics
Description	We performed absolute quantification (AQUA) of viral proteins by targeted quantitative proteomics and conducted tandem mass tag (TMT)-based proteomics on the three rAAV and wtAAV production systems to identify potential factors limiting rAAV productivity in HEK293 cells
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:48:33.128.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yu-Chieh Lin
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-08 06:53:07	ID requested
1	2024-07-03 02:18:09	announced
⏵ 2	2024-10-22 06:48:35	announced	2024-10-22: Updated project metadata.

Publication List

Lin YC, Lu M, Cai W, Hu WS, Comparative transcriptomic and proteomic kinetic analysis of adeno-associated virus production systems. Appl Microbiol Biotechnol, 108(1):385(2024) [pubmed]
10.1007/s00253-024-13203-5;

Lin YC, Lu M, Cai W, Hu WS, Comparative transcriptomic and proteomic kinetic analysis of adeno-associated virus production systems. Appl Microbiol Biotechnol, 108(1):385(2024) [pubmed]

10.1007/s00253-024-13203-5;

Keyword List

submitter keyword: rAAV, proteomics, wtAAV

submitter keyword: rAAV, proteomics, wtAAV

Contact List

Wei-Shou Hu
contact affiliation	Department of Chemical Engineering and Materials Science, University of Minnesota
contact email	wshu@umn.edu
lab head
Yu-Chieh Lin
contact affiliation	Department of Chemical Engineering and Materials Science, University of Minnesota
contact email	lin00917@umn.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD050484
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD050484

PRIDE project URI

Repository Record List

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