PXD050409

PXD050409 is an original dataset announced via ProteomeXchange.

Title	Modulation of the endophytic strain Kosakonia radicincitans UYSO10 proteome by sugarcane roots exudate
Description	The objective of this work was to expand the knowledge about the possible mechanisms involved in the early stages of the interaction between the diazotrophic endophytic strain Kosakonia radicincitans UYSO10 and sugarcane plants. For that, a proteomic approach was conducted in the strain UYSO10 exposed or not to sugarcane exudates. Results showed that in the presence of root exudates the UYSO10 strain senses the environment and adapts its proteome to transport and metabolize different nutrients, and to interact with the host plant. These results deepen the knowledge of the potential mechanisms involved in the early stage of plant-bacteria endophyte interaction.
HostingRepository	PRIDE
AnnounceDate	2024-12-03
AnnouncementXML	Submission_2024-12-03_06:36:26.585.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Analía Lima
SpeciesList	scientific name: Kosakonia; NCBI TaxID: 1330547; scientific name: Bacteria; NCBI TaxID: NCBITaxon:2;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ

Revision	Datetime	Status	ChangeLog Entry
0	2024-03-06 10:33:42	ID requested
⏵ 1	2024-12-03 06:36:26	announced

10.1007/S11104-024-07112-9;

submitter keyword: Kosakonia radicincitans, proteomics, exudates, sugarcane

Rosario Durán
contact affiliation	Unidad de Bioquímica y Proteómica Analíticas, Institut Pasteur de Montevideo, Uruguay
contact email	duran@pasteur.edu.uy
lab head
Analía Lima
contact affiliation	Institut Pasteur de Montevideo, Proteomic and Analytical Biochemistry Unit
contact email	alima@pasteur.edu.uy
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/12/PXD050409

PRIDE project URI

• PRIDE
  1. PXD050409
     1. Label: PRIDE project
     2. Name: Modulation of the endophytic strain Kosakonia radicincitans UYSO10 proteome by sugarcane roots exudate