PXD050108 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | ATAD5-BAZ1B interaction modulates PCNA ubiquitination during DNA repair |
Description | Mono-ubiquitinated PCNA (mono-Ub-PCNA) is generated when replication forks stall and facilitates the DNA lesion bypass process. After resolving a replication stall, Ub-PCNA needs to be de-ubiquitinated to resume high-fidelity DNA synthesis. ATAD5 cooperates with UAF1-USP1 to de-ubiquitinate mono-Ub-PCNA. However, it remains unclear how Ub-PCNA de-ubiquitination is regulated in a timely manner. We found that BAZ1B, a regulatory subunit of the chromatin-remodeling complex, fine-tunes de-ubiquitination of Ub-PCNA. The BAZ1B binding region of ATAD5 surrounds the ATAD5 UAF1-binding domain. Abrogation of the ATAD5-BAZ1B interaction leads to premature de-ubiquitination of Ub-PCNA after hydrogen peroxide treatment. BAZ1B-binding defective ATAD5 cells are more sensitive to oxidative stress compared to wild-type cells. These results suggest that BAZ1B inhibits premature Ub-PCNA de-ubiquitination to maintain genome integrity. |
HostingRepository | PRIDE |
AnnounceDate | 2025-05-06 |
AnnouncementXML | Submission_2025-05-06_13:11:08.422.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD050108 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Byung-gyu kim |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-02-24 16:49:01 | ID requested | |
⏵ 1 | 2025-05-06 13:11:09 | announced | |
Publication List
Keyword List
submitter keyword: BAZ1B, de-ubiquitination, DNA repair, USP1, SMARCA5, ATAD5,BAZ1B, UAF1, PCNA |
Contact List
Sukhyun Kang |
contact affiliation | Center for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea |
contact email | kangsh@ibs.re.kr |
lab head | |
Byung-gyu kim |
contact affiliation | Center for genomic integrity (CGI), Institute of basic science (IBS), UNIST, Ulsan, 44919, Republic of Korea |
contact email | goldenlion@ibs.re.kr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD050108
- Label: PRIDE project
- Name: ATAD5-BAZ1B interaction modulates PCNA ubiquitination during DNA repair