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PXD050108

PXD050108 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleATAD5-BAZ1B interaction modulates PCNA ubiquitination during DNA repair
DescriptionMono-ubiquitinated PCNA (mono-Ub-PCNA) is generated when replication forks stall and facilitates the DNA lesion bypass process. After resolving a replication stall, Ub-PCNA needs to be de-ubiquitinated to resume high-fidelity DNA synthesis. ATAD5 cooperates with UAF1-USP1 to de-ubiquitinate mono-Ub-PCNA. However, it remains unclear how Ub-PCNA de-ubiquitination is regulated in a timely manner. We found that BAZ1B, a regulatory subunit of the chromatin-remodeling complex, fine-tunes de-ubiquitination of Ub-PCNA. The BAZ1B binding region of ATAD5 surrounds the ATAD5 UAF1-binding domain. Abrogation of the ATAD5-BAZ1B interaction leads to premature de-ubiquitination of Ub-PCNA after hydrogen peroxide treatment. BAZ1B-binding defective ATAD5 cells are more sensitive to oxidative stress compared to wild-type cells. These results suggest that BAZ1B inhibits premature Ub-PCNA de-ubiquitination to maintain genome integrity.
HostingRepositoryPRIDE
AnnounceDate2025-05-06
AnnouncementXMLSubmission_2025-05-06_13:11:08.422.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD050108
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterByung-gyu kim
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02024-02-24 16:49:01ID requested
12025-05-06 13:11:09announced
Publication List
10.6019/PXD050108;
10.1038/s41467-024-55005-3;
Keyword List
submitter keyword: BAZ1B, de-ubiquitination, DNA repair, USP1, SMARCA5, ATAD5,BAZ1B, UAF1, PCNA
Contact List
Sukhyun Kang
contact affiliationCenter for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea
contact emailkangsh@ibs.re.kr
lab head
Byung-gyu kim
contact affiliationCenter for genomic integrity (CGI), Institute of basic science (IBS), UNIST, Ulsan, 44919, Republic of Korea
contact emailgoldenlion@ibs.re.kr
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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