PXD050082

PXD050082 is an original dataset announced via ProteomeXchange.

Title	Changes in the sap proteome of Eucalyptus grandis and Eucalyptus urophylla plants grown at elevated CO2 atmosphere
Description	The intense human activities can cause irreversible environmental problems. Eucalyptus is a forest species widely used in planted forests, with a great capacity to assist in the mitigation of CO2 emissions and accumulation due to its C3 metabolism and high retention of carbon molecules in its biomass. The objective of this study was to investigate the differences in the sap proteome of two Eucalyptus species grown in an atmosphere enriched with CO2. For this purpose, young Eucalyptus grandis and Eucalyptus urophylla plants were grown in growth chambers 20 days under controlled atmospheric CO2 rates. The vascular proteome revealed 146 extracellular proteins, and their relative abundance was associated with the enriched atmosphere treatments. The analysis of protein function and abundance revealed that E. grandis proteins are mainly involved in organic substance metabolism and proteolysis, while less abundant proteins are related to cellular defense responses. Similar results were obtained for E. urophylla, with the most abundant proteins performing metabolic functions, while the least abundant protein was related to oxidative stress. These results may contribute to a better understanding of the mechanisms involved in the response of eucalyptus species to increased CO2 and provide useful information for the management and cultivation of these species in high levels of carbon dioxide environments.
HostingRepository	PRIDE
AnnounceDate	2025-05-30
AnnouncementXML	Submission_2025-05-30_10:27:19.910.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD050082
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Felipe Silva
SpeciesList	scientific name: Eucalyptus urophylla; NCBI TaxID: 99020; scientific name: Eucalyptus grandis; NCBI TaxID: 71139;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-23 06:09:29	ID requested
⏵ 1	2025-05-30 10:27:20	announced

10.1007/S40415-025-01085-4;

10.6019/PXD050082;

submitter keyword: plant proteomics, long-distance signaling,climate change

Tiago Santana Balbuena
contact affiliation	Department of Agricultural, Livestock and Environmental Biotechnology, School of Agriculture and Veterinary Sciences, São Paulo State University, Jaboticabal, Brazil.
contact email	tiago.balbuena@unesp.br
lab head
Felipe Silva
contact affiliation	São Paulo State University
contact email	far.silva@unesp.br
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD050082

PRIDE project URI

• PRIDE
  1. PXD050082
     1. Label: PRIDE project
     2. Name: Changes in the sap proteome of Eucalyptus grandis and Eucalyptus urophylla plants grown at elevated CO2 atmosphere