PXD049710

PXD049710 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The ABCF proteins in Escherichia coli individually address "hard-to-translate" nascent peptide sequences.
Description	Total proteome analysis data for ABC-F (YheS, YbiT, EttA, and Uup) deletion strains in Escherichia coli.
HostingRepository	jPOST
AnnounceDate	2024-04-26
AnnouncementXML	Submission_2024-04-26_00:18:09.261.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tatsuya Niwa
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	S-carboxamidomethyl-L-cysteine; unknown modification
Instrument	instrument

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-19 21:47:48	ID requested
⏵ 1	2024-04-26 00:18:10	announced

Publication List

Chadani Y, Yamanouchi S, Uemura E, Yamasaki K, Niwa T, Ikeda T, Kurihara M, Iwasaki W, Taguchi H, The ABCF proteins in Escherichia coli individually cope with 'hard-to-translate' nascent peptide sequences. Nucleic Acids Res, 52(10):5825-5840(2024) [pubmed]

Chadani Y, Yamanouchi S, Uemura E, Yamasaki K, Niwa T, Ikeda T, Kurihara M, Iwasaki W, Taguchi H, The ABCF proteins in Escherichia coli individually cope with 'hard-to-translate' nascent peptide sequences. Nucleic Acids Res, 52(10):5825-5840(2024) [pubmed]

Keyword List

submitter keyword: ABC-F, translation stalling, polyproline, SecM, Intrinsic Ribosome Destabilization, EF-P, polyacidic, polybasic

submitter keyword: ABC-F, translation stalling, polyproline, SecM, Intrinsic Ribosome Destabilization, EF-P, polyacidic, polybasic

Contact List

Yuhei Chadani
lab head
Tatsuya Niwa
contact affiliation	Tokyo Institute of Technology
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002944/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002944/