PXD049692

PXD049692 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Phosphoproteomics of Natural Killer (NK) Cells Stimulated with Fibrin and IL-15
Description	Phosphoproteomic analysis of fibrin or IL-15 treated NK cells with timsTOF HT
HostingRepository	PRIDE
AnnounceDate	2025-01-29
AnnouncementXML	Submission_2025-01-29_04:41:30.719.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mehdi Bouhaddou
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	timsTOF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-19 09:08:50	ID requested
1	2024-06-26 15:21:35	announced
2	2024-07-01 12:59:21	announced	2024-07-01: Updated project metadata.
3	2024-07-02 06:42:34	announced	2024-07-02: Updated project metadata.
4	2024-10-22 06:47:31	announced	2024-10-22: Updated project metadata.
⏵ 5	2025-01-29 04:41:31	announced	2025-01-29: Updated project metadata.

Publication List

10.1038/s41586-024-07873-4;
Ryu JK, Yan Z, Montano M, Sozmen EG, Dixit K, Suryawanshi RK, Matsui Y, Helmy E, Kaushal P, Makanani SK, Deerinck TJ, Meyer-Franke A, Rios Coronado PE, Trevino TN, Shin MG, Tognatta R, Liu Y, Schuck R, Le L, Miyajima H, Mendiola AS, Arun N, Guo B, Taha TY, Agrawal A, MacDonald E, Aries O, Yan A, Weaver O, Petersen MA, Meza Acevedo R, Alzamora MDPS, Thomas R, Traglia M, Kouznetsova VL, Tsigelny IF, Pico AR, Red-Horse K, Ellisman MH, Krogan NJ, Bouhaddou M, Ott M, Greene WC, Akassoglou K, Fibrin drives thromboinflammation and neuropathology in COVID-19. Nature, 633(8031):905-913(2024) [pubmed]

10.1038/s41586-024-07873-4;

Ryu JK, Yan Z, Montano M, Sozmen EG, Dixit K, Suryawanshi RK, Matsui Y, Helmy E, Kaushal P, Makanani SK, Deerinck TJ, Meyer-Franke A, Rios Coronado PE, Trevino TN, Shin MG, Tognatta R, Liu Y, Schuck R, Le L, Miyajima H, Mendiola AS, Arun N, Guo B, Taha TY, Agrawal A, MacDonald E, Aries O, Yan A, Weaver O, Petersen MA, Meza Acevedo R, Alzamora MDPS, Thomas R, Traglia M, Kouznetsova VL, Tsigelny IF, Pico AR, Red-Horse K, Ellisman MH, Krogan NJ, Bouhaddou M, Ott M, Greene WC, Akassoglou K, Fibrin drives thromboinflammation and neuropathology in COVID-19. Nature, 633(8031):905-913(2024) [pubmed]

Keyword List

submitter keyword: timsTOF HT,NK cells, Phoshoproteomics

submitter keyword: timsTOF HT,NK cells, Phoshoproteomics

Contact List

Mehdi Bouhaddou
contact affiliation	Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA, USA Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, Los Angeles, CA, USA
contact email	bouhaddou@ucla.edu
lab head
Mehdi Bouhaddou
contact affiliation	UCLA
contact email	bouhaddoulab@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD049692
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD049692

PRIDE project URI

Repository Record List

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