PXD049410 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Effect of epinephrine on a proteome of Cutibacterium acnes |
Description | The importance of the impact of human hormones on commensal microbiota and microbial biofilms is established in lots of studies. In the present investigation, we studied the proteome of biofilms and planktonic cultures of skin actinobacterium Cutibacterium acnes. In our investigation, we tested the effect of epinephrine in concentrations 5 nM (normal blood level) and 5 µM (1000-fold higher) on 72 h biofilms and planktonic cultures in comparison with controls without the hormone administration. Also, we compared the samples treated with epinephrine in different concentrations. Also, we investigated the differences between planktonic cultures and biofilms and how the hormone influences those differences. The present database contains the raw data of proteins changes in their concentrations in described conditions. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_06:48:36.172.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Rustam Ziganshin |
SpeciesList | scientific name: Cutibacterium acnes subsp. defendens ATCC 11828; NCBI TaxID: 1091045; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-02-15 09:44:52 | ID requested | |
1 | 2024-07-03 02:07:02 | announced | |
⏵ 2 | 2024-10-22 06:48:37 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.3934/microbiol.2024019; |
Gannesen AV, Schelkunov MI, Ziganshin RH, Ovcharova MA, Sukhacheva MV, Makarova NE, Mart'yanov SV, Loginova NA, Mosolova AM, Diuvenji EV, Nevolina ED, Plakunov VK, biofilms and planktonic cultures in presence of epinephrine. AIMS Microbiol, 10(2):363-390(2024) [pubmed] |
Keyword List
submitter keyword: LC-MSMS,Cutibacterium acnes, epinephrine |
Contact List
Yury A. Nikolayev |
contact affiliation | Laboratory of viability of microorganisms, Federal research center “Fundamentals of biotechnology” of Russian Academy of sciences, Moscow, Russia |
contact email | nikolaevya@mail.ru |
lab head | |
Rustam Ziganshin |
contact affiliation | Shemyakin-Ovchinnikov Institute of bioorganic chemistry Russian Academy of Sciences |
contact email | rustam.ziganshin@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD049410
- Label: PRIDE project
- Name: Effect of epinephrine on a proteome of Cutibacterium acnes