PXD049367 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Alterations in the abundance of protamine proteoforms related to sperm chromatin packaging, obesity, and age in men with unexplained infertility |
Description | Protamine1 (P1) and Protamine 2 family (P2) are the most relevant nuclear proteins in the male gamete since are necessary to compact and protect the paternal genome. Human and mouse sperm contain a complex population of protamine proteoforms, which raises the interest to decipher whether it responds to a need of protein redundancy to ensure proper chromatin compaction, or whether specific protamine proteoforms have functional implications. In this study, we apply an optimized strategy based on Top-Down Mass Spectrometry to quantify alterations in the protamine proteoform profile of normozoospermic men with unexplained infertility and either molecular (high P1/P2) or lifestyle (obesity and advanced age) alterations. Accumulation of P2 immature forms was associated to higher P1/P2 ratios, suggesting an impaired processing of P2 in these patients. Men with obesity and intracellular oxidative stress revealed alterations in P1 proteoforms with mass shift(s) of +61 Da, either phosphorylated or not, and advanced age men showed a specific loss of diphosphorylated P1. These results point to alterations on protamine modifying mechanisms, such as proteolysis and phosphorylation, rather than on protamine synthesis, as critical factors for proper sperm chromatin maturity with impact on male fertility |
HostingRepository | PRIDE |
AnnounceDate | 2025-04-25 |
AnnouncementXML | Submission_2025-04-25_06:21:48.078.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Marta Vilaseca |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | 2-pyrrolidone-5-carboxylic acid (Gln); phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-02-14 05:30:39 | ID requested | |
⏵ 1 | 2025-04-25 06:21:48 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: proteoforms, top-down proteomics, protamines, male infertility,sperm, chromatin |
Contact List
Marta Vilaseca |
contact affiliation | Mass Spectrometry & Proteomics Core Facility (MSPCF) Institute for Research in Biomedicine (IRB Barcelona) Barcelona Institute of Science and Technology (BIST) C/ Baldiri Reixac, 10-12 08028 Barcelona - Spain |
contact email | masspe@irbbarcelona.org |
lab head | |
Marta Vilaseca |
contact affiliation | Mass Spectrometry & Proteomics Core Facility (MSPCF)
Institute for Research in Biomedicine (IRB Barcelona)
Barcelona Institute of Science and Technology (BIST)
C/ Baldiri Reixac, 10-12
08028 Barcelona - Spain |
contact email | masspe@irbbarcelona.org |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD049367
- Label: PRIDE project
- Name: Alterations in the abundance of protamine proteoforms related to sperm chromatin packaging, obesity, and age in men with unexplained infertility