PXD049312

PXD049312 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	K562 cell lysates prefractionated by various methods
Description	K562 cell lysates were prefractionated by protein reversed-phase chromatography (Prot-RP), SDS-PAGE, and high-pH peptide RP (Pept-RP) to compare their method characteristics. The starting material was prefractionated to 10 fractions for each method. Each prefractionation method was conducted in triplicate to generate 30 raw data per method.
HostingRepository	jPOST
AnnounceDate	2024-10-15
AnnouncementXML	Submission_2024-10-14_17:04:43.023.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shunsuke Takagi
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide; Met-loss; Met-loss+Acetyl; Acetyl
Instrument	instrument

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-10 02:15:28	ID requested
⏵ 1	2024-10-14 17:04:48	announced

Publication List

Takagi S, Suzuki N, Ishihama Y, Revisiting Protein Reversed-Phase Chromatography for Bottom-Up Proteomics. J Proteome Res, 23(10):4704-4714(2024) [pubmed]

Takagi S, Suzuki N, Ishihama Y, Revisiting Protein Reversed-Phase Chromatography for Bottom-Up Proteomics. J Proteome Res, 23(10):4704-4714(2024) [pubmed]

Keyword List

submitter keyword: Protein prefractionation, Reversed-phase chromatography, Proteoform, Biopharmaceuticals

submitter keyword: Protein prefractionation, Reversed-phase chromatography, Proteoform, Biopharmaceuticals

Contact List

Yasushi Ishihama
lab head
Shunsuke Takagi
contact affiliation	Daiichi Sankyo Co., Ltd.
dataset submitter

Full Dataset Link List

jPOST dataset URI
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jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002507/