PXD049114

PXD049114 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A CPSF-like phosphatase module links transcription termination to chromatin silencing
Description	Aiming to find the connection between RNA processing and chromatin remodelling, we found that a complex removing activating histone marks at FLC named FLD complex interacts with ARPF1, one of the homologs in Arabidopsis of the yeast Swd2. In this experiment, we used a FLAG-tagged version of the ARPF1 protein to find its protein partners.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:39:07.261.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD049114
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Gerhard Saalbach
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-02-02 03:31:15	ID requested
1	2024-05-13 04:12:49	announced
⏵ 2	2024-10-22 06:39:07	announced	2024-10-22: Updated project metadata.

Publication List

10.6019/PXD049114;

10.6019/PXD049114;

Keyword List

submitter keyword: proteomics, RNA-processing, Swd2-Like, chromatin, co-immunoprecipitatiion,CPSF

submitter keyword: proteomics, RNA-processing, Swd2-Like, chromatin, co-immunoprecipitatiion,CPSF

Contact List

Caroline Dean
contact affiliation	Group leader Department Biochemistry and Metabolism John Innes Centre JIC Norwich Reseach Park Norwich, UK
contact email	caroline.dean@jic.ac.uk
lab head
Gerhard Saalbach
contact affiliation	Biological Chemistry
contact email	gerhard.saalbach@jic.ac.uk
dataset submitter

Full Dataset Link List

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PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD049114

PRIDE project URI

Repository Record List

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