PXD048016

PXD048016 is an original dataset announced via ProteomeXchange.

Title	Optimization of protein identifications by exploring several crhomatographic and search engine parameters
Description	This project delves into how to optimize the number of protein identifications in shotgun proteomics by varying experimental conditions such as the length of the chromagraphic column, and by choosing appropriate peptide search engines.
HostingRepository	PRIDE
AnnounceDate	2024-07-27
AnnouncementXML	Submission_2024-07-26_16:21:43.793.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jesus Castano
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-20 15:17:23	ID requested
⏵ 1	2024-07-26 16:21:44	announced

Dataset with its publication pending

submitter keyword: HeLa samples

Francis Beaudry
contact affiliation	Professor, Faculté de Medecine Veterinaire, Université de Montréal
contact email	francis.beaudry@umontreal.ca
lab head
Jesus Castano
contact affiliation	Postdoctoral Fellow
contact email	jesus.david.castano.uruena@umontreal.ca
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD048016

PRIDE project URI

• PRIDE
  1. PXD048016
     1. Label: PRIDE project
     2. Name: Optimization of protein identifications by exploring several crhomatographic and search engine parameters