PXD047932

PXD047932 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Palaeoproteomic analysis of a second hominin specimen from Baishiya Karst Cave, China
Description	An archaeological bone fragment from Baishiya Karst Cave, China, was identified as stemming from a hominin through ZooMS (Zooarchaeology by Mass Spectrometry). Shotgun palaeoproteomic analyses were thereafter conducted on the specimen to refine the taxonomic identification and perform phylogenetic analyses. The reconstruted proteome shows that the newly described Baishiya Karst Cave individual, Xiahe 2, is most closely related to the high-coverage published genome from a Denisovan individual.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:40:53.226.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD047932
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Zandra Fagernäs
SpeciesList	scientific name: Homo; NCBI TaxID: 9605;
ModificationList	hydroxylated proline; monohydroxylated residue; deamidated residue
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-19 02:28:03	ID requested
1	2024-05-22 01:38:30	announced
2	2024-07-08 03:37:25	announced	2024-07-08: Updated project metadata.
⏵ 3	2024-10-22 06:40:53	announced	2024-10-22: Updated project metadata.

Publication List

10.6019/PXD047932;
10.1038/S41586-024-07612-9;

10.6019/PXD047932;

10.1038/S41586-024-07612-9;

Keyword List

submitter keyword: Skeletal proteome,Palaeoproteomics, Archaeology, Denisovan

submitter keyword: Skeletal proteome,Palaeoproteomics, Archaeology, Denisovan

Contact List

Frido Welker
contact affiliation	Globe Institute, University of Copenhagen, Denmark
contact email	frido.welker@sund.ku.dk
lab head
Zandra Fagernäs
contact affiliation	Globe Institute, University of Copenhagen
contact email	zandra.fagernas@sund.ku.dk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD047932
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD047932

PRIDE project URI

Repository Record List

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