PXD047848

PXD047848 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteome analysis of serum proteins enriched by lectins
Description	Serum proteins enriched by 37 different lectins were analyzed by LC-MS/MS. It was found that the enrichment process with Solanum tuberosum lectin (STL) and Lycopersicon esculentum lectin (LEL) detected many trace proteins in the serum. In addition, combinations of lectins were examined, and the combination of STL and LEL was found to be optimal for observing serum trace proteins. The enrichment method by STL/LEL was able to collect trace proteins from sera of various animal species as well as humans. We further applied this STL/LEL method to systemic lupus erythematosus (SLE) models and control mouse serum to search for serum proteins altered by SLE.
HostingRepository	jPOST
AnnounceDate	2024-02-23
AnnouncementXML	Submission_2024-02-22_22:25:15.094.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ryo Konno
SpeciesList	scientific name: Bos taurus; NCBI TaxID: 9913; scientific name: Gallus gallus; NCBI TaxID: 9031; scientific name: Capra hircus; NCBI TaxID: 9925; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: cellular organisms; NCBI TaxID: 131567; scientific name: Rattus norvegicus; NCBI TaxID: 10116; scientific name: Ovis aries; NCBI TaxID: 9940;
ModificationList	S-carboxamidomethyl-L-cysteine; unknown modification
Instrument	Q Exactive; Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-15 01:27:33	ID requested
⏵ 1	2024-02-22 22:25:16	announced

Publication List

Nakajima D, Konno R, Miyashita Y, Ishikawa M, Ohara O, Kawashima Y, Lectins. Int J Mol Sci, 25(2):(2024) [pubmed]

Nakajima D, Konno R, Miyashita Y, Ishikawa M, Ohara O, Kawashima Y, Lectins. Int J Mol Sci, 25(2):(2024) [pubmed]

Keyword List

submitter keyword: Solanum Tuberosum lectin, Lycopersicon esculentum lectin, serum, plasma, biomarker

submitter keyword: Solanum Tuberosum lectin, Lycopersicon esculentum lectin, serum, plasma, biomarker

Contact List

Yusuke Kawashima
lab head
Ryo Konno
contact affiliation	Kazusa DNA Research Institute.
dataset submitter

Full Dataset Link List

jPOST dataset URI
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jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002420/