PXD047816

PXD047816 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic analysis of purified extracellular vesicles and crude migrasome from U87MG cells
Description	This project has been performed to unveil the proteome of both purified extracellular vesicles (EVs) and crude migrasomes produced from U87MG gliolbastoma cells. Retraction fibers and migrasomes (R&Ms) are newly discovered membranous structures which are revealed to be generated by traction forces of migrating or deviding cells. However, it is still unknown what sorts of proteins are existed within these cellular structures. Thus, we performed the purification of both extracellular vesicles (EVs) and R&Ms (i.e., crude migrasome) from glioblastoma cells to validate the difference between EVs and R&Ms in terms of their protein components.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:21:54.530.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hee-Sung Ahn
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-13 23:31:21	ID requested
1	2024-01-14 01:04:15	announced
⏵ 2	2024-10-22 06:21:54	announced	2024-10-22: Updated project metadata.

Publication List

10.1101/2022.06.08.495398;

10.1101/2022.06.08.495398;

Keyword List

submitter keyword: Human, LC-MSMS, Autophagosome, Retraction fiber, ITGA5, Migrasome, ER stress, Cell death

submitter keyword: Human, LC-MSMS, Autophagosome, Retraction fiber, ITGA5, Migrasome, ER stress, Cell death

Contact List

Kyunggon Kim
contact affiliation	Asan Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea; Department of Digital Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
contact email	kkkon1@amc.seoul.kr
lab head
Hee-Sung Ahn
contact affiliation	Asan Medical Center
contact email	zaulim3@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD047816
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD047816

PRIDE project URI

Repository Record List

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