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PXD047751

PXD047751 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleDifferences between static supernatant-, static biofilm- and flow biofilm-cells of two Lactiplantibacillus plantarum strains.
DescriptionThis study was conducted to analyze phenotypic and proteomic differences of two Lactiplantibacillus plantarum strains (WCFS1, model strain from human saliva, and CIP104448, stool isolate) when a biofilm was produced under static conditions (well researched), or with the addition of flow (novel).
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_06:43:39.458.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterSjef Boeren
SpeciesList scientific name: Lactobacillus plantarum WCFS1; NCBI TaxID: 220668; scientific name: Lactiplantibacillus sp.; NCBI TaxID: 2767846;
ModificationListS-carboxamidoethyl-L-cysteine; acetylated residue; monohydroxylated residue; deamidated residue
InstrumentOrbitrap Exploris 480
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-12-12 05:25:09ID requested
12024-06-03 02:27:42announced
22024-10-22 06:43:40announced2024-10-22: Updated project metadata.
Publication List
10.1016/j.bioflm.2024.100197;
Huijboom L, Rashtchi P, Tempelaars M, Boeren S, van der Linden E, Habibi M, Abee T, strains in static and dynamic flow environments. Biofilm, 7():100197(2024) [pubmed]
Keyword List
submitter keyword: flow-static biofilm, stress resistance, exponential vs stationary, cell wall,Lactiplantibacillus plantarum
Contact List
Sjef Boeren
contact affiliationWageningen University
contact emailsjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliationBiochemistry
contact emailsjef.boeren@wur.nl
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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