PXD047751 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Differences between static supernatant-, static biofilm- and flow biofilm-cells of two Lactiplantibacillus plantarum strains. |
Description | This study was conducted to analyze phenotypic and proteomic differences of two Lactiplantibacillus plantarum strains (WCFS1, model strain from human saliva, and CIP104448, stool isolate) when a biofilm was produced under static conditions (well researched), or with the addition of flow (novel). |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_06:43:39.458.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sjef Boeren |
SpeciesList | scientific name: Lactobacillus plantarum WCFS1; NCBI TaxID: 220668; scientific name: Lactiplantibacillus sp.; NCBI TaxID: 2767846; |
ModificationList | S-carboxamidoethyl-L-cysteine; acetylated residue; monohydroxylated residue; deamidated residue |
Instrument | Orbitrap Exploris 480 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-12-12 05:25:09 | ID requested | |
1 | 2024-06-03 02:27:42 | announced | |
⏵ 2 | 2024-10-22 06:43:40 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1016/j.bioflm.2024.100197; |
Huijboom L, Rashtchi P, Tempelaars M, Boeren S, van der Linden E, Habibi M, Abee T, strains in static and dynamic flow environments. Biofilm, 7():100197(2024) [pubmed] |
Keyword List
submitter keyword: flow-static biofilm, stress resistance, exponential vs stationary, cell wall,Lactiplantibacillus plantarum |
Contact List
Sjef Boeren |
contact affiliation | Wageningen University |
contact email | sjef.boeren@wur.nl |
lab head | |
Sjef Boeren |
contact affiliation | Biochemistry |
contact email | sjef.boeren@wur.nl |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD047751 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD047751
- Label: PRIDE project
- Name: Differences between static supernatant-, static biofilm- and flow biofilm-cells of two Lactiplantibacillus plantarum strains.