PXD047676

PXD047676 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Phosphoproteomics of dried blood collected on Mitra devices
Description	Venous blood was collected in Li-heparin or EDTA blood tubes and loaded onto 20 uL Mitra devices or separated to plasma as detailed in metadata. Samples were denatured in 5.5% SDC, reduced and alkylated, and digested with TPCK-trypsin followed by acid precipitation. 1 mg of filtered precipitates were enriched for phosphopeptides using TiO. Data was acquied using nanoLC, Evosep One or SPE-ZipChip. Data was acquired by DIA (Exploris 480 or TimsTOF Pro 2) or LFQ-DDA. DIA data was analyzed with Spectronaut 18 and DDA with Skyline.
HostingRepository	MassIVE
AnnounceDate	2023-12-10
AnnouncementXML	Submission_2023-12-10_21:41:11.890.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matt Foster
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	Carbamidomethyl; Phospho
Instrument	Orbitrap Exploris 480; Orbitrap Exploris 240; timsTOF Pro 2

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-10 07:42:10	ID requested
⏵ 1	2023-12-10 21:41:12	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: phosphorylation, data-independent acquisition

submitter keyword: phosphorylation, data-independent acquisition

Contact List

Matthew W. Foster
contact affiliation	Duke University
contact email	mwfoster@duke.edu
lab head
Matt Foster
contact affiliation	Duke University
contact email	mwfoster@duke.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000093624/