PXD047509

PXD047509 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The chromatin factors SET-26 and HCF-1 oppose the histone deacetylase HDA-1 in longevity and gene regulation in C. elegans
Description	In this study, a GFP-tagged version of the protein HCF-1 was immuno-precipitated from C. elegans lysates of the strain IU171 and co-purifying proteins were identified by LC-MS/MS. As a negative control, the same immuno-precipitation was conducted from wild-type (strain N2) worms that did not carry a HCF-1::GFP transgene.
HostingRepository	PRIDE
AnnounceDate	2024-01-29
AnnouncementXML	Submission_2024-01-29_01:14:29.556.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christian Riedel
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: 6239;
ModificationList	phosphorylated residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-12-04 07:38:50	ID requested
⏵ 1	2024-01-29 01:14:30	announced

Publication List

10.1101/2023.03.20.531974;
Emerson FJ, Chiu C, Lin LY, Riedel CG, Zhu M, Lee SS, . bioRxiv, ():(2023) [pubmed]

10.1101/2023.03.20.531974;

Emerson FJ, Chiu C, Lin LY, Riedel CG, Zhu M, Lee SS, . bioRxiv, ():(2023) [pubmed]

Keyword List

submitter keyword: LC-MSMS,C. elegans, immuno precipitation

submitter keyword: LC-MSMS,C. elegans, immuno precipitation

Contact List

Christian G. Riedel
contact affiliation	Dept of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden
contact email	christian.riedel@ki.se
lab head
Christian Riedel
contact affiliation	Dept of Biosciences and Nutrition, Karolinska Institutet, Stockholm
contact email	christian.riedel@ki.se
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD047509
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD047509

PRIDE project URI

Repository Record List

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