PXD047168

PXD047168 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comprehensive proteomics characterization identify biomarkers of liver cancer subtypes
Description	Recurrence and metastasis remain the major obstacles to prognosis of hepatocellular carcinoma (HCC), but the relationship between proteomics and poor prognosis need to be studied more systematically. In this study, we performed the proteomics data collected from 85 HCC tumors and 18 adjacent normal tissues (ANTs) to establish the proteomics profiles of HCC and reveal the correlation between poteomics and ubiquitomics features of tumor tissues in HCC. Our data bring new insights on multi-omics data and have the potential to further understand the relationship between post-translational modification (PTM) levels of proteins and different molecular and clinical features of HCC patients. XAD1—XAD18 --- HCC adjacent normal tissues XC1—XC85--- HCC tumor tissues
HostingRepository	PRIDE
AnnounceDate	2025-04-07
AnnouncementXML	Submission_2025-04-07_11:20:31.263.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Chuanming Xie
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-11-22 04:23:26	ID requested
⏵ 1	2025-04-07 11:20:32	announced

Publication List

10.1097/hep.0000000000001096;
Lin XT, Luo YD, Mao C, Gong Y, Hou Y, Zhang LD, Gu YP, Wu D, Zhang J, Zhang YJ, Tan DH, Xie CM, Integrated ubiquitomics characterization of hepatocellular carcinomas. Hepatology, ():(2024) [pubmed]

10.1097/hep.0000000000001096;

Lin XT, Luo YD, Mao C, Gong Y, Hou Y, Zhang LD, Gu YP, Wu D, Zhang J, Zhang YJ, Tan DH, Xie CM, Integrated ubiquitomics characterization of hepatocellular carcinomas. Hepatology, ():(2024) [pubmed]

Keyword List

submitter keyword: Proteomics
Human
HCC;

submitter keyword: Proteomics

Human

HCC;

Contact List

Chuanming Xie
contact affiliation	Third Military Medical University
contact email	chuanming506@126.com
lab head
Chuanming Xie
contact affiliation	Third Military Medical University
contact email	chuanming506@126.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD047168
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD047168

PRIDE project URI

Repository Record List

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