PXD047121 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Investigation of Interaction Partners of Desmin and Lamin B Proteins Using High Resolution Mass Spectroscopy |
Description | The aim of the project is to identify the proteins expected to be participated in desmin-lamin B interaction by high resolution mass spectrometry. Co-immunoprecipitation assay was performed using zebrafish skeletal muscle tissue followed by mass spectrometry to identify interacting proteins. In silico analysis was conducted to identify common proteins for desmin and lamin B and investigate the pathways that common proteins involved. |
HostingRepository | PRIDE |
AnnounceDate | 2024-05-10 |
AnnouncementXML | Submission_2024-05-10_05:25:45.149.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ecem Kural |
SpeciesList | scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-11-21 03:14:10 | ID requested | |
⏵ 1 | 2024-05-10 05:25:45 | announced | |
Publication List
Keyword List
submitter keyword: LC-MS/MS, skeletal muscle, zebrafish |
Contact List
Pervin Dincer |
contact affiliation | Hacettepe University, Department of Medical Biology, Ankara, Turkey |
contact email | pdincer@hacettepe.edu.tr |
lab head | |
Ecem Kural |
contact affiliation | Hacettepe University |
contact email | ecemkural@hacettepe.edu.tr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD047121 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD047121
- Label: PRIDE project
- Name: Investigation of Interaction Partners of Desmin and Lamin B Proteins Using High Resolution Mass Spectroscopy