PXD046998 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Shotgun proteomics of lung tumors and normal tumor-adjacent tissue of non-small cell lung cancer patients |
Description | Lung tumors, as well as normal tumor-adjacent (NTA) tissue of non-small cell lung cancer (NSCLC) patients, were collected and subjected label-free quantitation shotgun proteomics in data-independent mode to identify differences between the tumors and adjacent tissue. By employing in-depth proteomics, we identified several pathways that are up- or downregulated in the tumors of non-small cell lung cancer patients. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-27 |
AnnouncementXML | Submission_2023-11-27_04:30:32.804.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sophie Honeder |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | timsTOF Pro |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-11-15 16:39:29 | ID requested | |
⏵ 1 | 2023-11-27 04:30:33 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: shotgun proteomics, NSCLC,Lung tumor |
Contact List
Ruth Birner-Gruenberger |
contact affiliation | Faculty of Technical Chemistry, Institute of Chemical Technologies and Analytics, Technische Universität Wien, Getreidemarkt 9/164, 1060 Vienna, Austria |
contact email | ruth.birner-gruenberger@tuwien.ac.at |
lab head | |
Sophie Honeder |
contact affiliation | Diagnostic and Research Institute of Pathology, Medical University of Graz, Stiftingtalstraße 6, 8010 Graz, Austria |
contact email | sophie.honeder@medunigraz.at |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/11/PXD046998 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD046998
- Label: PRIDE project
- Name: Shotgun proteomics of lung tumors and normal tumor-adjacent tissue of non-small cell lung cancer patients