PXD046966

PXD046966 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	DSBSO-based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples
Description	We applied our previously established Alkyne-A-DSBSO-based in vivo XL-MS analytical platform on two types of breast cancer PDX samples cross-linking. Coupled with the LC-MSn strategy, the experiments enable us to obtain information on cancer-related protein-protein interactions since experimenting on PDX models.
HostingRepository	PRIDE
AnnounceDate	2024-03-20
AnnouncementXML	Submission_2024-03-20_03:50:12.495.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Fenglong Jiao
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-11-14 14:56:33	ID requested
⏵ 1	2024-03-20 03:50:13	announced

Publication List

10.1021/acs.jproteome.3c00832;
Jiao F, Yu C, Wheat A, Chen L, Lih TM, Zhang H, Huang L, DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples. J Proteome Res, ():(2024) [pubmed]

10.1021/acs.jproteome.3c00832;

Jiao F, Yu C, Wheat A, Chen L, Lih TM, Zhang H, Huang L, DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples. J Proteome Res, ():(2024) [pubmed]

Keyword List

submitter keyword: breast cancer,PDX, cross-linking mass spectrometry

submitter keyword: breast cancer,PDX, cross-linking mass spectrometry

Contact List

Lan Huang
contact affiliation	Department of Physiology & Biophysics University of California, Irvine
contact email	lanhuang@uci.edu
lab head
Fenglong Jiao
contact affiliation	University of California, Irvine
contact email	fenglonj@uci.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/03/PXD046966
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/03/PXD046966

PRIDE project URI

Repository Record List

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