PXD046818

PXD046818 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomic portrait of the healthy human gut microbiota
Description	Metaproteomic portrait of the healthy human gut microbiota. Re-analysis of existing datasets, selected based on the following inclusion criteria: human cohort including at least 5 healthy (clearly not labeled as diseased) adult (>18 years old) individuals; data derived from LC-MS/MS DDA label-free analysis of fecal samples (with neither subcellular fractionation of microbial cells nor offline fractionation of peptides); availability of raw MS data on public repositories.
HostingRepository	PRIDE
AnnounceDate	2024-07-03
AnnouncementXML	Submission_2024-07-03_04:29:48.218.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alessandro Tanca
SpeciesList	scientific name: human gut metagenome; NCBI TaxID: 408170;
ModificationList	iodoacetamide derivatized residue
Instrument	orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-11-09 07:36:36	ID requested
1	2024-05-16 05:44:19	announced
⏵ 2	2024-07-03 04:29:49	announced	2024-07-03: Updated project metadata.

Publication List

Tanca A, Palomba A, Fiorito G, Abbondio M, Pagnozzi D, Uzzau S, Metaproteomic portrait of the healthy human gut microbiota. NPJ Biofilms Microbiomes, 10(1):54(2024) [pubmed]
10.1038/s41522-024-00526-4;

Tanca A, Palomba A, Fiorito G, Abbondio M, Pagnozzi D, Uzzau S, Metaproteomic portrait of the healthy human gut microbiota. NPJ Biofilms Microbiomes, 10(1):54(2024) [pubmed]

10.1038/s41522-024-00526-4;

Keyword List

submitter keyword: metaproteomics, healthy human gut, functions, gut microbiota, stool

submitter keyword: metaproteomics, healthy human gut, functions, gut microbiota, stool

Contact List

Sergio Uzzau
contact affiliation	Department of Biomedical Sciences, University of Sassari, Italy
contact email	uzzau@uniss.it
lab head
Alessandro Tanca
contact affiliation	Department of Biomedical Sciences, University of Sassari, Sassari, Italy
contact email	aletanca@uniss.it
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD046818
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD046818

PRIDE project URI

Repository Record List

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