PXD046463

PXD046463 is an original dataset announced via ProteomeXchange.

Title	Ubiquitinome of G401 SMARCB1-deficient rhabdoid tumor cells
Description	In this study, DCAF5, a substrate receptor that has been shown to modulate the levels of SWI/SNF subunits, which are components of a chromatin remodeling complex. Here we preformed ubiquitinome proteomics to discover the underlying response of DCAF5 loss on ubiquitylation of SWI/SNF subunits. Furthermore, we determine what sites on SWI/SNF components decrease in ubiquitylation upon DCAF5 loss.
HostingRepository	PRIDE
AnnounceDate	2024-03-25
AnnouncementXML	Submission_2024-03-25_07:21:36.022.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zhiping Wu
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2023-10-27 09:24:20	ID requested
⏵ 1	2024-03-25 07:21:36	announced

10.1038/S41586-024-07250-1;

submitter keyword: ubiquitinome, TMTpro, SWI/SNF,DCAF5

Junmin Peng
contact affiliation	St. Jude Children's Research Hospital
contact email	junmin.peng@stjude.org
lab head
Zhiping Wu
contact affiliation	St. Jude Children's Research Hospital
contact email	zhiping.wu@stjude.org
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/03/PXD046463

PRIDE project URI

• PRIDE
  1. PXD046463
     1. Label: PRIDE project
     2. Name: Ubiquitinome of G401 SMARCB1-deficient rhabdoid tumor cells