PXD046281

PXD046281 is an original dataset announced via ProteomeXchange.

Title	Borrelia PeptideAtlas: A proteome resource of common Borrelia burgdorferi isolates for Lyme community
Description	Lyme disease is a result from an infection by the spirochete Borrelia burgdorferi, and is the leading vector-borne disease in North America. Due to the genomic and proteomic variability of different B. burgdorferi isolates, the study and further comparison of their proteome is key to understand the biology and infectivity of these spirochetes. Mass spectrometry-based proteomics was used to assemble peptide datasets of laboratory isolates B31, MM1, B31-ML23, and the infective isolates B31-5A4, B31-A3, and 297, as well as other public datasets, and is publicly available as the Borrelia PeptideAtlas (http://www.peptideatlas.org/builds/borrelia/). These datasets include information on total proteome, secretome, and membrane proteome of the B. burgdorferi.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:57:36.407.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD046281
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Robert Moritz
SpeciesList	scientific name: Borreliella burgdorferi; NCBI TaxID: 139;
ModificationList	phosphorylated residue
Instrument	Orbitrap Fusion Lumos; Bruker Daltonics timsTOF series; TripleTOF 5600; Q Exactive; LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2023-10-21 07:09:17	ID requested
1	2024-10-07 11:20:59	announced
⏵ 2	2024-10-22 06:57:37	announced	2024-10-22: Updated project metadata.

10.6019/PXD046281;

submitter keyword: Borrelia burgdorferi, proteomics, mass spectrometry

Robert Moritz
contact affiliation	Institute for Systems Biology
contact email	rmoritz@systemsbiology.org
lab head
Robert Moritz
contact affiliation	Institute for Systems Biology
contact email	rmoritz@systemsbiology.org
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/09/PXD046281

PRIDE project URI

• PRIDE
  1. PXD046281
     1. Label: PRIDE project
     2. Name: Borrelia PeptideAtlas: A proteome resource of common Borrelia burgdorferi isolates for Lyme community