PXD046182

PXD046182 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Cervical Cancer Tissue Immunopeptidomics
Description	10 cervical cancer tissue tumour resections were analysed using an immunopeptidomics workflow.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:25:58.355.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD046182
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nicola Ternette
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-10-17 04:50:34	ID requested
1	2024-01-26 07:12:45	announced
⏵ 2	2024-10-22 06:25:59	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41467-023-44460-z;
Liao H, Barra C, Zhou Z, Peng X, Woodhouse I, Tailor A, Parker R, Carr, é A, Borrow P, Hogan MJ, Paes W, Eisenlohr LC, Mallone R, Nielsen M, Ternette N, MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nat Commun, 15(1):661(2024) [pubmed]
10.6019/PXD046182;

10.1038/s41467-023-44460-z;

Liao H, Barra C, Zhou Z, Peng X, Woodhouse I, Tailor A, Parker R, Carr, é A, Borrow P, Hogan MJ, Paes W, Eisenlohr LC, Mallone R, Nielsen M, Ternette N, MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer. Nat Commun, 15(1):661(2024) [pubmed]

10.6019/PXD046182;

Keyword List

ProteomeXchange project tag: Human Immuno-Peptidome Project (HUPO-HIPP) (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: Cervical Cancer, high-risk HPV infection, Immunopeptidomics, HLA-associated peptides

ProteomeXchange project tag: Human Immuno-Peptidome Project (HUPO-HIPP) (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: Cervical Cancer, high-risk HPV infection, Immunopeptidomics, HLA-associated peptides

Contact List

Nicola Ternette
contact affiliation	University of Oxford University of Utrecht
contact email	nicola.ternette@ndm.ox.ac.uk
lab head
Nicola Ternette
contact affiliation	University of Oxford
contact email	nicola.ternette@ndm.ox.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD046182
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD046182

PRIDE project URI

Repository Record List

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