PXD045889

PXD045889 is an original dataset announced via ProteomeXchange.

Title	The characterisation of protein binding in paediatric extracorporeal membrane oxygenation (ECMO) circuits
Description	The present study aims to characterise proteins bound to circuits collected from children on extracorporeal membrane oxygenation (ECMO). ECMO circuits were collected from 6 patients. Quantification of concentrations for proteins bound to the ECMO circuit samples was performed using bicinchoninic acid (BCA) protein assay, whilst characterisation of the bound proteome was performed using Data-independent acquisition Mass Spectrometry (DIA-MS). Reactome Over-representation Pathway Analyses tool was used to identify functional pathways corresponding to the common proteins bound to circuits across all patients.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_04:05:21.114.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Laura Dagley
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	timsTOF Pro

Revision	Datetime	Status	ChangeLog Entry
0	2023-10-03 21:12:14	ID requested
⏵ 1	2024-10-07 04:05:21	announced

10.1097/PCC.0000000000003591;

submitter keyword: extracorporeal membrane oxygenation (ECMO)

Prof Vera Ignjatovic
contact affiliation	Professor (PAR) of Pediatrics Head, Translational Research and Innovation Laboratory (TRaIL), Johns Hopkins All Children's Institute for Clinical and Translational Research
contact email	vignjat1@jhmi.edu
lab head
Laura Dagley
contact affiliation	WEHI
contact email	dagley.l@wehi.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/10/PXD045889

PRIDE project URI

• PRIDE
  1. PXD045889
     1. Label: PRIDE project
     2. Name: The characterisation of protein binding in paediatric extracorporeal membrane oxygenation (ECMO) circuits