PXD045759

PXD045759 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Time-course of ischemia-reperfusion in a mouse model
Description	We have performed an unbiased, open-search analysis of the oxidative PTMs and quantitative multiplexed proteomics that take place in the mouse heart tissue during the first 48h after I/R. Surgically-induced MI was performed and animals were sacrificed at 10 min, 20 min, 40 min, 80 min, 2 hours, 6 hours, 12 hours, 24 hours, and 48 hours after reperfusion (n = 3 per group), and 3 mice were sacrificed with no intervention and used as control group. Whole hearts tissue was collected for proteomics evaluation.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:42:24.897.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Inmaculada Jorge
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	methylthiolated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-09-28 01:25:47	ID requested
1	2024-05-24 01:35:41	announced
⏵ 2	2024-10-22 06:42:25	announced	2024-10-22: Updated project metadata.

Publication List

10.3390/antiox13010106;
Binek A, Castans C, Jorge I, Bagwan N, Rodr, í, guez JM, Fern, á, ndez-Jim, é, nez R, Gal, á, n-Arriola C, Oliver E, G, ó, mez M, Clemente-Morag, ó, n A, Ibanez B, Camafeita E, V, á, zquez J, Oxidative Post-translational Protein Modifications upon Ischemia/Reperfusion Injury. Antioxidants (Basel), 13(1):(2024) [pubmed]

10.3390/antiox13010106;

Binek A, Castans C, Jorge I, Bagwan N, Rodr, í, guez JM, Fern, á, ndez-Jim, é, nez R, Gal, á, n-Arriola C, Oliver E, G, ó, mez M, Clemente-Morag, ó, n A, Ibanez B, Camafeita E, V, á, zquez J, Oxidative Post-translational Protein Modifications upon Ischemia/Reperfusion Injury. Antioxidants (Basel), 13(1):(2024) [pubmed]

Keyword List

submitter keyword: PTMs, mouse, ischemia reperfusion (I/R), heart tissue,quantitative proteomics

submitter keyword: PTMs, mouse, ischemia reperfusion (I/R), heart tissue,quantitative proteomics

Contact List

Jesús Vázquez Cobos
contact affiliation	Fundación Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain
contact email	jesus.vazquez@cnic.es
lab head
Inmaculada Jorge
contact affiliation	Vascular Biology and Inflammation
contact email	ijorge@cnic.es
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD045759
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD045759

PRIDE project URI

Repository Record List

[ + ]