PXD045667 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Mouse rod photoreceptor Prkaa1 knockout phosphoproteomics |
Description | Mouse rod photoreceptor specific Prkaa1 knockouts were isolated from retinas and processed for phosphoproteomics to elucidate downstream kinase targets. Prkaa1 is one of the isoforms for the catalytic subunit of AMP-activated protein kinase (AMPK), an essential nutrient sensing enzyme responsible for maintaining many metabolic processes. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_06:45:06.438.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Tae Jun Lee |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | phosphorylated residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-09-25 11:36:07 | ID requested | |
1 | 2024-06-15 22:59:13 | announced | |
⏵ 2 | 2024-10-22 06:45:07 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1172/jci.insight.173707; |
Lee TJ, Sasaki Y, Ruzycki PA, Ban N, Lin JB, Wu HT, Santeford A, Apte RS, Catalytic isoforms of AMP-activated protein kinase differentially regulate IMPDH activity and photoreceptor neuron function. JCI Insight, 9(4):(2024) [pubmed] |
Keyword List
submitter keyword: Mouse, AMPK, rod photoreceptors, Prkaa1, phosphoproteomics |
Contact List
Rajendra Apte |
contact affiliation | Washington University in St. Louis School of Medicine |
contact email | apte@wustl.edu |
lab head | |
Tae Jun Lee |
contact affiliation | Washington University in St. Louis School of Medicine |
contact email | t.lee@wustl.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD045667 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD045667
- Label: PRIDE project
- Name: Mouse rod photoreceptor Prkaa1 knockout phosphoproteomics