PXD045510 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Flash proteotyping of microbial isolates by tandem mass spectrometry |
Description | Flash proteotyping is a methodology for ultra-fast identification of microorganisns by tandem mass spectrometry. Here, we obtained results on five reference strains and ten new bacterial isolates. The methodology is based on direct sample infusion into the mass spectromete and an original, highly sensitive procedure for data processing and taxonomic identification. |
HostingRepository | PRIDE |
AnnounceDate | 2023-12-21 |
AnnouncementXML | Submission_2023-12-21_14:34:54.739.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD045510 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Jean ARMENGAUD |
SpeciesList | scientific name: Roseomonas mucosa; NCBI TaxID: 207340; scientific name: Deinococcus proteolyticus MRP; NCBI TaxID: 693977; scientific name: Kocuria rhizophila; NCBI TaxID: 72000; scientific name: Pseudomonas zeshuii; NCBI TaxID: 1076620; scientific name: Microvirga ossetica; NCBI TaxID: 1882682; scientific name: Ruegeria pomeroyi DSS-3; NCBI TaxID: 246200; scientific name: Pseudomonas putida KT2440; NCBI TaxID: 160488; scientific name: Paenibacillus catalpae; NCBI TaxID: 1045775; scientific name: Micrococcus luteus (Micrococcus lysodeikticus); NCBI TaxID: 1270; scientific name: Staphylococcus equorum; NCBI TaxID: 246432; scientific name: Staphylococcus warneri; NCBI TaxID: 1292; scientific name: Klebsiella aerogenes KCTC 2190; NCBI TaxID: 1028307; scientific name: Pseudomonas psychrotolerans; NCBI TaxID: 237610; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Exploris 480 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-09-20 02:46:54 | ID requested | |
⏵ 1 | 2023-12-21 14:34:55 | announced | |
Publication List
Keyword List
submitter keyword: Taxonomy,Proteomics, isolates, Proteotyping, Bacteria, Identification |
Contact List
Jean Armengaud |
contact affiliation | CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France |
contact email | jean.armengaud@cea.fr |
lab head | |
Jean ARMENGAUD |
contact affiliation | Li2D |
contact email | jean.armengaud@cea.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD045510
- Label: PRIDE project
- Name: Flash proteotyping of microbial isolates by tandem mass spectrometry