PXD045495

PXD045495 is an original dataset announced via ProteomeXchange.

Title	HeLa benchmark datasets DirectMS1 MSGF+
Description	This technical dataset contains LC-MS runs of HeLa protein digest analyzed with a common shotgun proteomics pipeline based on MSGF+ and Percolator and DirectMS1 pipeline.
HostingRepository	PRIDE
AnnounceDate	2023-09-25
AnnouncementXML	Submission_2023-09-25_05:48:04.633.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	VladimirGorshkov
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Eclipse; Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2023-09-19 10:10:12	ID requested
⏵ 1	2023-09-25 05:48:04	announced

Dataset with its publication pending

submitter keyword: HeLa, proteomics, technical, DirectMS1

FrankKjeldsen
contact affiliation	Professor, Department of Biochemistry and Molecular Biology, University of Southern Denmark
contact email	frankk@bmb.sdu.dk
lab head
VladimirGorshkov
contact affiliation	University of Southern Denmark
contact email	vgor@bmb.sdu.dk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD045495

PRIDE project URI

• PRIDE
  1. PXD045495
     1. Label: PRIDE project
     2. Name: HeLa benchmark datasets DirectMS1 MSGF+