PXD045361

PXD045361 is an original dataset announced via ProteomeXchange.

Title	Coniochaeta ligniaria NRRL 30616 v1.0 LC-MSMS
Description	The influence of substrate composition on extracellular protein production was evaluated in media containing glucose, lodgepole pine or aspen as carbon sources. Common to all media, basal salts contained, per liter, 2g NH4NO3, 2g KH2, 0.5 g MgSO4·7H2O, 0.1 g CaCl2·2H2O, 1 mg thiamine hydrochloride and 1 mL trace element solution (Teknova, T1001). Aspen and pine were added to 5 g per liter, while the glucose cultures received 2.5 g per liter. All cultures contained 100 mL media in 500 ml Erlenmeyer flasks and, following inoculation with macerated mycelium, incubated on a rotary shaker (100 RPM) at 24°C. Aspen (Populus grandidentata) and lodgepole pine (Pinus contorta) were Wiley milled and sieved to one mm mesh prior to inoculation. Triplicate cultures were harvested after 5 and 10 days.
HostingRepository	PRIDE
AnnounceDate	2023-09-15
AnnouncementXML	Submission_2023-09-15_10:35:46.631.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD045361
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	GregSabat
SpeciesList	scientific name: Coniochaeta ligniaria NRRL 30616; NCBI TaxID: 1408157;
ModificationList	monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2023-09-13 11:54:07	ID requested
⏵ 1	2023-09-15 10:35:47	announced

10.6019/PXD045361;

submitter keyword: LC-MSMS, lignocellulose, NRRL 30616 v1.0,Coniochaeta ligniaria

DanielCullen
contact affiliation	Forest Products Laboratory, Institute for Microbial and Biochemical Sciences, USDA
contact email	daniel.cullen@wisc.edu
lab head
GregSabat
contact affiliation	University of Wisconsin
contact email	gsabat@wisc.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD045361

PRIDE project URI

• PRIDE
  1. PXD045361
     1. Label: PRIDE project
     2. Name: Coniochaeta ligniaria NRRL 30616 v1.0 LC-MSMS