PXD044778

PXD044778 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Single-cell and Spatial Architecture of Primary Liver Cancer
Description	Using single-cell RNA sequencing, spatial transcriptomic and bulk multi-omics, we elaborated a molecular architecture of 3 PLC types, namely hepatocellular carcinoma (HCC), intrahepatic cholangiocarcinoma (ICC) and combined hepatocellular-cholangiocarcinoma (CHC) from a high-resolution perspective.
HostingRepository	PRIDE
AnnounceDate	2024-01-26
AnnouncementXML	Submission_2024-01-26_06:20:04.481.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	peiyun zhou
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-23 01:51:23	ID requested
⏵ 1	2024-01-26 06:20:05	announced

Publication List

Zhou PY, Zhou C, Gan W, Tang Z, Sun BY, Huang JL, Liu G, Liu WR, Tian MX, Jiang XF, Wang H, Tao CY, Fang Y, Qu WF, Huang R, Zhu GQ, Huang C, Fu XT, Ding ZB, Gao Q, Zhou J, Shi YH, Yi Y, Fan J, Qiu SJ, Single-cell and spatial architecture of primary liver cancer. Commun Biol, 6(1):1181(2023) [pubmed]
10.1038/s42003-023-05455-0;

Zhou PY, Zhou C, Gan W, Tang Z, Sun BY, Huang JL, Liu G, Liu WR, Tian MX, Jiang XF, Wang H, Tao CY, Fang Y, Qu WF, Huang R, Zhu GQ, Huang C, Fu XT, Ding ZB, Gao Q, Zhou J, Shi YH, Yi Y, Fan J, Qiu SJ, Single-cell and spatial architecture of primary liver cancer. Commun Biol, 6(1):1181(2023) [pubmed]

10.1038/s42003-023-05455-0;

Keyword List

submitter keyword: Primary liver cancer, multi-omics, hepatocellular carcinoma, intrahepatic cholangiocarcinoma, spatial transcriptomics, combined hepatocellular-cholangiocarcinoma, single-cell RNA-Seq

submitter keyword: Primary liver cancer, multi-omics, hepatocellular carcinoma, intrahepatic cholangiocarcinoma, spatial transcriptomics, combined hepatocellular-cholangiocarcinoma, single-cell RNA-Seq

Contact List

Peiyun Zhou
contact affiliation	Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University, and Key Laboratory of Carcinogenesis and Cancer Invasion, Ministry of Education
contact email	maikestar99@163.com
lab head
peiyun zhou
contact affiliation	Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University, and Key Laboratory of Carcinogenesis and Cancer Invasion, Ministry of Education
contact email	maikestar99@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD044778
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD044778

PRIDE project URI

Repository Record List

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