PXD044759

PXD044759 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Tandem mass spectrometry proteotyping of extremophiles sampled from high-altitude Andean lakes
Description	The proteome of the SS13 isolate assigned to the Chromatiaceae family was assessed by shotgun proteomics using a pan-proteomics database for the genus Rheinheimera and a whole genome sequencing -derived database.
HostingRepository	PRIDE
AnnounceDate	2024-05-02
AnnouncementXML	Submission_2024-05-02_08:49:25.035.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD044759
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: unclassified Chromatiaceae; NCBI TaxID: 82569;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-22 23:53:12	ID requested
⏵ 1	2024-05-02 08:49:26	announced

Publication List

10.1021/acs.jproteome.3c00538;
Runzheimer K, Lozano C, Boy D, Boy J, Godoy R, Matus FJ, Engel D, Pavletic B, Leuko S, Armengaud J, Moeller R, Exploring Andean High-Altitude Lake Extremophiles through Advanced Proteotyping. J Proteome Res, 23(3):891-904(2024) [pubmed]
10.6019/PXD044759;

10.1021/acs.jproteome.3c00538;

Runzheimer K, Lozano C, Boy D, Boy J, Godoy R, Matus FJ, Engel D, Pavletic B, Leuko S, Armengaud J, Moeller R, Exploring Andean High-Altitude Lake Extremophiles through Advanced Proteotyping. J Proteome Res, 23(3):891-904(2024) [pubmed]

10.6019/PXD044759;

Keyword List

submitter keyword: High-altitude Andean lakes, halophiles, isolate, Proteotyping,Bacteria, Atacama Desert, taxonomy, Proteomics, extremophiles, Altiplano

submitter keyword: High-altitude Andean lakes, halophiles, isolate, Proteotyping,Bacteria, Atacama Desert, taxonomy, Proteomics, extremophiles, Altiplano

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD044759
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD044759

PRIDE project URI

Repository Record List

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