PXD044755

PXD044755 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteotyping of sets of six microbial isolates by tandem mass spectrometry.
Description	Proteotyping of mixtures of isolates was carried out by shotgun proteomics and phylopeptidomic interpretation to identify the microorganisms at the species taxonomical rank.
HostingRepository	PRIDE
AnnounceDate	2024-05-02
AnnouncementXML	Submission_2024-05-02_08:56:35.839.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD044755
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Sulfitobacter indolifex; NCBI TaxID: 225422; scientific name: Marivirga tractuosa; NCBI TaxID: 1006; scientific name: Ruegeria pomeroyi; NCBI TaxID: 89184; scientific name: Klebsiella aerogenes; NCBI TaxID: 548; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932; scientific name: Sagittula stellata; NCBI TaxID: 52603;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-22 21:35:21	ID requested
⏵ 1	2024-05-02 08:56:36	announced

Publication List

10.1021/acs.jproteome.3c00535;
10.6019/PXD044755;
Chabas M, Armengaud J, Alpha-Bazin B, A Simplified Label-Free Method for Proteotyping Sets of Six Isolates in a Single Liquid Chromatography-High-Resolution Tandem Mass Spectrometry Analysis. J Proteome Res, 23(3):881-890(2024) [pubmed]

10.1021/acs.jproteome.3c00535;

10.6019/PXD044755;

Chabas M, Armengaud J, Alpha-Bazin B, A Simplified Label-Free Method for Proteotyping Sets of Six Isolates in a Single Liquid Chromatography-High-Resolution Tandem Mass Spectrometry Analysis. J Proteome Res, 23(3):881-890(2024) [pubmed]

Keyword List

submitter keyword: species,proteomics, identification, yeast, taxonomy, bacteria, multiplexing, proteotyping

submitter keyword: species,proteomics, identification, yeast, taxonomy, bacteria, multiplexing, proteotyping

Contact List

Jean ARMENGAUD
contact affiliation	CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD044755
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD044755

PRIDE project URI

Repository Record List

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