PXD044605

PXD044605 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Low-input proteomics using lauryl maltose neopentyl glycol
Description	We developed a sample preparation method for low-input proteomics using lauryl maltose neopentyl glycol. Using the developed method, we performed proteome analysis of 100ng of HEK293T proteins, coIP samples, and serum extracellular vesicles, and further challenged label-free single-cell proteomics of HEK293F cells.
HostingRepository	jPOST
AnnounceDate	2024-03-06
AnnouncementXML	Submission_2024-03-12_17:07:35.020.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ryo Konno
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Bos taurus; NCBI TaxID: 9913;
ModificationList	S-carboxamidomethyl-L-cysteine; unknown modification; L-methionine sulfoxide; N6-biotinyl-L-lysine; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine
Instrument	Orbitrap Exploris 480; Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-16 23:52:19	ID requested
1	2024-03-05 17:59:51	announced
⏵ 2	2024-03-12 17:07:35	announced	2024-03-13: Updated PubMed.

Publication List

Konno R, Ishikawa M, Nakajima D, Endo Y, Ohara O, Kawashima Y, Universal Pretreatment Development for Low-input Proteomics Using Lauryl Maltose Neopentyl Glycol. Mol Cell Proteomics, 23(4):100745(2024) [pubmed]

Konno R, Ishikawa M, Nakajima D, Endo Y, Ohara O, Kawashima Y, Universal Pretreatment Development for Low-input Proteomics Using Lauryl Maltose Neopentyl Glycol. Mol Cell Proteomics, 23(4):100745(2024) [pubmed]

Keyword List

submitter keyword: LMNG, LASP, DMNG, single cell proteomics, SCP, EVOSEP ONE, coIP, extracellular vesicles

submitter keyword: LMNG, LASP, DMNG, single cell proteomics, SCP, EVOSEP ONE, coIP, extracellular vesicles

Contact List

Yusuke Kawashima
lab head
Ryo Konno
contact affiliation	Kazusa DNA Research Institute.
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002281/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST002281/