PXD044574

PXD044574 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Kv2.1 IP dataset On_BeadMK8_2018
Description	This project aimed to identify proteins copurifying with the Kv2.1 potassium channel from lysates prepared from crosslinked mouse brain homogenates. Comparison samples were prepared from Kv2.1 knockout mouse brains. Parallel immunopurifications were perfofmed for the unrelated Kv1.2 potassium channel.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:04:39.323.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD044574
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	James Trimmer
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; deamidated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-14 14:57:27	ID requested
1	2023-08-29 16:30:15	announced
2	2023-09-12 07:55:16	announced	2023-09-12: Updated project metadata.
⏵ 3	2023-11-14 09:04:48	announced	2023-11-14: Updated project metadata.

Publication List

Vierra NC, Ribeiro-Silva L, Kirmiz M, van der List D, Bhandari P, Mack OA, Carroll J, Le Monnier E, Aicher SA, Shigemoto R, Trimmer JS, -activated PKA signaling. Nat Commun, 14(1):5231(2023) [pubmed]
Vierra NC, Kirmiz M, van der List D, Santana LF, Trimmer JS, Kv2.1 mediates spatial and functional coupling of L-type calcium channels and ryanodine receptors in mammalian neurons. Elife, 8():(2019) [pubmed]
10.6019/PXD044574;
Kirmiz M, Gillies TE, Dickson EJ, Trimmer JS, Neuronal ER-plasma membrane junctions organized by Kv2-VAP pairing recruit Nir proteins and affect phosphoinositide homeostasis. J Biol Chem, 294(47):17735-17757(2019) [pubmed]

Vierra NC, Ribeiro-Silva L, Kirmiz M, van der List D, Bhandari P, Mack OA, Carroll J, Le Monnier E, Aicher SA, Shigemoto R, Trimmer JS, -activated PKA signaling. Nat Commun, 14(1):5231(2023) [pubmed]

Vierra NC, Kirmiz M, van der List D, Santana LF, Trimmer JS, Kv2.1 mediates spatial and functional coupling of L-type calcium channels and ryanodine receptors in mammalian neurons. Elife, 8():(2019) [pubmed]

10.6019/PXD044574;

Kirmiz M, Gillies TE, Dickson EJ, Trimmer JS, Neuronal ER-plasma membrane junctions organized by Kv2-VAP pairing recruit Nir proteins and affect phosphoinositide homeostasis. J Biol Chem, 294(47):17735-17757(2019) [pubmed]

Keyword List

submitter keyword: immunopurified, crosslinked,brain

submitter keyword: immunopurified, crosslinked,brain

Contact List

James S.
contact affiliation	Department of Physiology & Membrane Biology, University of California Davis School of Medicine
contact email	jtrimmer@ucdavis.edu
lab head
James Trimmer
contact affiliation	University of California Davis
contact email	jtrimmer@ucdavis.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/08/PXD044574
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/08/PXD044574

PRIDE project URI

Repository Record List

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