PXD044484

PXD044484 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	UHPLC-MS/MS analysis of S-nitrosylated proteins involved in autophagy in Triticum aestivum roots
Description	In the present work, we analyzed the patterns of protein S-nitrosylation during the inductionof autophagy in сommon wheat (Triticum aestivum) roots. S-nitrosylated proteins were accumulated in plant tissues as a result of artificially induced autophagy, visualized usingWestern blot and identified by bottom-up proteomics methods. Further, the obtained data was analyzed by bioinformatics methods to predict possible S-nitrosylation sites and protein-protein interactions between S-nitrosylated proteins and possible targets. These resultscontribute to the development of the efficient protocols for identification and analysis of S-nitrosylated proteins in plants.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:18:59.426.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD044484
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Egor Repkin
SpeciesList	scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	timsTOF Pro 2

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-08-10 11:02:01	ID requested
1	2023-12-30 21:43:38	announced
⏵ 2	2024-10-22 06:18:59	announced	2024-10-22: Updated project metadata.

Publication List

10.3390/LIFE13102024;
10.6019/PXD044484;

10.3390/LIFE13102024;

10.6019/PXD044484;

Keyword List

submitter keyword: autophagy, nitric oxide, S-nitrosylation of proteins,Triticum aestivum

submitter keyword: autophagy, nitric oxide, S-nitrosylation of proteins,Triticum aestivum

Contact List

Andrej Aleksandrovich Frolov
contact affiliation	Laboratory of Analytical Biochemistry and Biotechnology, Timiryazev Institute of Plant Physiology, Russian Academy of Sciences
contact email	frolov@ifr.moscow
lab head
Egor Repkin
contact affiliation	Saint-Petersburg State University
contact email	erepkin53@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/12/PXD044484
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/12/PXD044484

PRIDE project URI

Repository Record List

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